selected publications
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article
- Anteroposterior polarity and elongation in the absence of extraembryonic tissues and spatially localised signalling in Gastruloids, mammalian embryonic organoids
- Arrested coalescence of multicellular aggregates.
- Axis specification in zebrafish is robust to cell mixing and reveals a regulation of pattern formation by morphogenesis.
- Dynamic imaging of the growth plate cartilage reveals multiple contributors to skeletal morphogenesis
- Dynamic structure and protein expression of the live embryonic heart captured by 2-photon light sheet microscopy and retrospective registration. publication description
- Dynamics of anteroposterior axis establishment in a mammalian embryo-like system
- Gastruloids: embryonic organoids from mouse embryonic stem CellsMouse embryonic stem cells (mESCs) to study patterning and development in early mammalian embryos.
- Gastruloids: embryonic organoids from mouse embryonic stem cells to study patterning and development in early mammalian embryos.
- Hyperspectral phasor analysis enables multiplexed 5D in vivo imaging
- Imaging the beating heart with macroscopic phase stamping.
- Localizing transcripts to single cells suggests an important role of uncultured deltaproteobacteria in the termite gut hydrogen economy.
- MOrgAna: accessible quantitative analysis of organoids with machine learning
- Multidimensional quantitative analysis of mRNA expression within intact vertebrate embryos
- Multidimensional quantitative analysis of mRNA expression within intact vertebrate embryos
- Periodic formation of epithelial somites from human pluripotent stem cells
- Rethinking embryology in vitro: A synergy between engineering, data science and theory
- Sculpting tissues by phase transitions
- Sculpting with stem cells: how models of embryo development take shape
- Self-organised symmetry breaking in zebrafish reveals feedback from morphogenesis to pattern formation
- Single-cell Bayesian deconvolution
- Spatio-Temporal Differences in Dystrophin Dynamics at mRNA and Protein Levels Revealed by a Novel FlipTrap Line.
- Studying evolution of the primary body axis in vivo and in vitro
- Studying evolution of the primary body axis in vivo and in vitro.
- Tissue 'melting' sculpts embryo.
- Understanding the interplay of membrane trafficking, cell surface mechanics, and stem cell differentiation.
- linus: Conveniently explore, share, and present large-scale biological trajectory data from a web browser
- linus: Conveniently explore, share, and present large-scale biological trajectory data in a web browser