selected publications
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article
- A GyrB-GyrA fusion protein expressed in yeast cells is able to remove DNA supercoils but cannot substitute eukaryotic topoisomerase II
- A method for genome-wide analysis of DNA helical tension by means of psoralen-DNA photobinding
- Asymmetric removal of supercoils suggests how topoisomerase II simplifies DNA topology
- Chromatin regulates DNA torsional energy via topoisomerase II-mediated relaxation of positive supercoils
- Cloning, functional analysis and post-transcriptional regulation of a type II DNA topoisomerase from Leishmania infantum. A new potential target for anti-parasite drugs
- Condensin minimizes topoisomerase II‐mediated entanglements of DNA in vivo
- Condensin pinches a short negatively supercoiled DNA loop during each round of ATP usage
- DNA Topology and Global Architecture of Point Centromeres
- DNA knots occur in intracellular chromatin.
- DNA knots reveal a chiral organization of DNA in phage capsids
- DNA transport by a type II DNA topoisomerase: Evidence in favor of a two-gate mechanism
- DNA transport by a type II topoisomerase: Direct evidence for a two-gate mechanism
- Dysbiosis and relapse-related microbiome in inflammatory bowel disease: A shotgun metagenomic approach
- Electrophoretic analysis of the DNA supercoiling activity of DNA gyrase
- Expression of transgenic PPP1CC2 in the testis of Ppp1cc-null mice rescues spermatid viability and spermiation but does not restore normal sperm tail ultrastructure, sperm motility, or fertility
- Failure to relax negative supercoiling of DNA is a primary cause of mitotic hyper-recombination in topoisomerase-deficient yeast cells
- Fractal dimension and localization of DNA knots
- Genome urbanization: clusters of topologically co-regulated genes delineate functional compartments in the genome of Saccharomyces cerevisiae.
- Human gut metatranscriptome changes induced by a fermented milk product are associated with improved tolerance to a flatulogenic diet
- In silico, in vitro and in vivo imageries of type II topoisomerases: Comment on “Disentangling DNA molecules” by Alexander Vologodskii
- Intracellular nucleosomes constrain a DNA linking number difference of −1.26 that reconciles the Lk paradox
- Keeping intracellular DNA untangled: A new role for condensin?
- Knotting probability of DNA molecules confined in restricted volumes: DNA knotting in phage capsids
- Positional dependence of transcriptional inhibition by DNA torsional stress in yeast chromosomes
- Production of highly knotted DNA by means of cosmid circularization inside phage capsids
- Quantitative disclosure of DNA knot chirality by high-resolution 2D-gel electrophoresis.
- Reduced diversity of faecal microbiota in Crohn's disease revealed by a metagenomic approach
- Structure and Chromosomal Organization of Yeast Genes Regulated by Topoisomerase II
- The capture of a DNA double helix by an ATP-dependent protein clamp: A key step in DNA transport by type II DNA topoisomerases
- The mechanisms of DNA topoisomerases
- The path of the DNA along the dimer interface of topoisomerase II
- The torsional state of DNA within the chromosome
- Topoisomerase II is required for the production of long Pol II gene transcripts in yeast
- Topoisomerase II minimizes DNA entanglements by proofreading DNA topology after DNA strand passage
- Topoisomerase II regulates yeast genes with singular chromatin architectures
- Topoisomerase II, not topoisomerase I, is the proficient relaxase of nucleosomal DNA
- Topoisomerase II: A fitted mechanism for the chromatin landscape
- Topoisomerases
- Topology of viral DNA
- Transcriptional inhibition by DNA torsional stress
- Transcriptional supercoiling boosts topoisomerase II-mediated knotting of intracellular DNA
- Varying levels of positive and negative supercoiling differently affect the efficiency with which topoisomerase II catenates and decatenates DNA